Cbx1

Mus musculus chromobox 1 (Cbx1)

Properties

GeneCbx1
EntrezID 12412
RefSeqIDs NM_007622
GeneCardID
Allen Brain 12197
UniProtIDs with links Q9CYJ8 P83917

Clusters expressing Cbx1

Table shows clusters that express the gene at a trinarization score >= 0.95

Expression Index Symbol Description Region
0.3607 1 TEGLU1 Excitatory neurons, cerebral cortex Telencephalon
0.3277 2 TEGLU3 Excitatory neurons, cerebral cortex Telencephalon
0.438 3 TEGLU2 Excitatory neurons, cerebral cortex Telencephalon
0.8727 4 TEGLU20 Excitatory neurons, cerebral cortex Telencephalon
0.4317 5 TEGLU11 Excitatory neurons, cerebral cortex Telencephalon
0.3912 6 TEGLU12 Excitatory neurons, cerebral cortex Telencephalon
0.433 7 TEGLU10 Excitatory neurons, cerebral cortex Telencephalon
0.3911 8 TEGLU9 Excitatory neurons, cerebral cortex Telencephalon
0.4285 9 TEGLU8 Excitatory neurons, cerebral cortex Telencephalon
0.5125 10 TEGLU7 Excitatory neurons, cerebral cortex Telencephalon
0.3701 12 TEGLU13 Excitatory neurons, cerebral cortex Telencephalon
0.3254 14 TEGLU5 Excitatory neurons, cerebral cortex Telencephalon
0.4098 15 TEGLU16 Excitatory neurons, cerebral cortex Telencephalon
0.4677 16 TEGLU15 Excitatory neurons, cerebral cortex Telencephalon
0.389 17 TEGLU17 Excitatory neurons, cerebral cortex Telencephalon
0.4262 18 TEGLU18 Excitatory neurons, cerebral cortex Telencephalon
0.573 19 TEGLU19 Excitatory neurons, cerebral cortex Telencephalon
0.3462 21 TEGLU21 Excitatory neurons, hippocampus CA1 Telencephalon
0.3072 22 TEGLU4 Excitatory neurons, cerebral cortex Telencephalon
0.3382 23 TEGLU24 Excitatory neurons, hippocampus CA1 Telencephalon
0.4318 24 TEGLU23 Excitatory neurons, hippocampus CA3 Telencephalon
0.2869 25 DGGRC1 Granule neuroblasts, dentate gyrus Telencephalon
0.6616 34 DGNBL2 Granule neuroblasts, dentate gyrus Telencephalon
0.6101 35 DGNBL1 Granule neuroblasts, dentate gyrus Telencephalon
0.999 36 SZNBL Neuronal intermidate progenitor cells Telencephalon
0.4299 37 OBNBL3 Neuroblasts, olfactory bulb Telencephalon
0.302 44 OBNBL5 Inhibitory neurons, olfactory bulb Telencephalon
0.3599 47 DEINH1 Inhibitory neurons, thalamus Diencephalon
0.3941 49 TEINH17 Axo-axonic, cortex/hippocampus Telencephalon
0.479 50 TEINH18 Basket and bistratified cells, cortex/hippocampus Telencephalon
0.6452 51 TEINH19 Hippocamposeptal projection, cortex/hippocampus Telencephalon
0.4312 52 TEINH21 Sleep-active, long-range projection interneurons, cortex/hippocampus Telencephalon
0.4099 53 TEINH16 Ivy and MGE-derived neurogliaform cells, cortex/hippocampus Telencephalon
0.2928 54 TEINH15 CGE-derived neurogliaform cells, cortex/hippocampus Telencephalon
0.3791 55 TEINH14 CGE-derived neurogliaform cells Cxcl14+, cortex/hippocampus Telencephalon
0.5612 56 TEINH20 Inhibitory interneurons, hippocampus Telencephalon
0.638 57 TEINH13 Trilaminar cells, hippocampus Telencephalon
0.6321 58 TEINH12 Non-border Cck interneurons, cortex/hippocampus Telencephalon
0.3951 59 TEINH9 Non-border Cck interneurons, hippocampus Telencephalon
0.5542 60 TEINH10 R-LM border Cck interneurons, cortex/hippocampus Telencephalon
0.5273 61 TEINH11 R-LM border Cck interneurons, cortex/hippocampus Telencephalon
0.3426 62 TEINH4 Interneuron-selective interneurons, cortex/hippocampus Telencephalon
0.3563 63 TEINH5 Interneuron-selective interneurons, cortex/hippocampus Telencephalon
0.5882 65 TEINH7 Interneuron-selective interneurons, hippocampus Telencephalon
0.4414 66 TEINH6 Interneuron-selective interneurons, cortex/hippocampus Telencephalon
0.5868 67 TECHO Cholinergic interneurons, telencephalon Telencephalon
0.7544 68 DECHO1 Cholinergic neurons, septal nucleus, Meissnert and diagonal band Diencephalon
0.4615 69 HBCHO4 Afferent nuclei of cranial nerves III-V Rhombencephalon
0.6111 70 HBCHO3 Afferent nuclei of cranial nerves VI-XII Rhombencephalon
0.375 71 HBADR Adrenergic cell groups of the medulla Rhombencephalon
0.5217 72 HBNOR Noradrenergic neurons of the medulla Rhombencephalon
0.3619 78 HBSER1 Serotonergic neurons, hindbrain Rhombencephalon
0.4862 79 HBSER2 Serotonergic neurons, hindbrain Rhombencephalon
0.3333 80 HBSER3 Serotonergic neurons, hindbrain Rhombencephalon
0.3594 81 HBSER5 Serotonergic neurons, hindbrain Rhombencephalon
0.2733 84 TEINH2 Inhibitory neurons, septal nucleus Telencephalon
0.42 97 SCINH11 Central canal neurons, spinal cord Spinal cord
0.5172 100 SCINH8 Inhibitory neurons, spinal cord Spinal cord
0.3803 101 SCINH7 Inhibitory neurons, spinal cord Spinal cord
0.6782 102 SCINH6 Inhibitory neurons, spinal cord Spinal cord
0.5909 103 SCINH5 Inhibitory neurons, spinal cord Spinal cord
0.4595 104 SCINH4 Inhibitory neurons, spinal cord Spinal cord
0.4242 105 SCINH3 Inhibitory neurons, spinal cord Spinal cord
0.4701 107 SCINH2 Inhibitory neurons, spinal cord Spinal cord
0.3308 109 SCGLU2 Excitatory neurons, spinal cord Spinal cord
0.3833 111 SCGLU4 Excitatory neurons, spinal cord Spinal cord
0.5556 112 SCGLU5 Excitatory neurons, spinal cord Spinal cord
0.3429 113 SCGLU6 Excitatory neurons, spinal cord Spinal cord
0.3052 116 SCGLU9 Excitatory neurons, spinal cord Spinal cord
0.3676 117 SCGLU10 Excitatory neurons, spinal cord Spinal cord
0.29 120 HBGLU2 Excitatory neurons, hindbrain Rhombencephalon
0.4018 121 MEGLU2 Excitatory neurons, midbrain Mesencephalon
0.3212 122 MEGLU3 Excitatory neurons, midbrain Mesencephalon
0.277 123 DEGLU5 Excitatory neurons, midbrain Mesencephalon
0.4563 124 MEGLU1 Excitatory neurons, midbrain Mesencephalon
0.4197 126 MEGLU8 Excitatory neurons, midbrain Mesencephalon
0.5556 127 MEGLU9 Excitatory neurons, midbrain Mesencephalon
0.463 128 MEGLU10 Excitatory neurons, midbrain Mesencephalon
0.5542 129 MEGLU11 Excitatory neurons, midbrain Mesencephalon
0.3566 131 MEGLU6 Excitatory neurons, midbrain Mesencephalon
0.3843 132 MEGLU5 Excitatory neurons, midbrain Mesencephalon
0.4118 133 MEGLU4 Excitatory neurons, midbrain Mesencephalon
0.4058 135 DECHO2 Cholinergic neurons, habenula Diencephalon
0.5577 136 HBGLU1 Excitatory neurons, hindbrain Rhombencephalon
0.293 137 DEGLU1 Excitatory neurons, thalamus Diencephalon
0.6576 138 DEGLU2 Excitatory neurons, hypothalamus Diencephalon
0.2668 139 DEGLU3 Excitatory neurons, thalamus Diencephalon
0.3663 140 DEGLU4 Excitatory neurons, thalamus Diencephalon
0.4898 141 MEINH12 Inhibitory neurons, midbrain Mesencephalon
0.3564 142 MEINH11 Inhibitory neurons, midbrain Mesencephalon
0.4672 143 MEINH10 Inhibitory neurons, midbrain Mesencephalon
0.3175 144 MEINH9 Inhibitory neurons, midbrain Mesencephalon
0.3377 145 MEINH5 Inhibitory neurons, midbrain Mesencephalon
0.3765 148 MEINH4 Inhibitory neurons, midbrain Mesencephalon
0.3333 150 HBINH5 Inhibitory neurons, hindbrain Rhombencephalon
0.3427 151 MEINH2 Inhibitory neurons, midbrain Mesencephalon
0.3344 152 DEINH3 Inhibitory neurons, hypothalamus Diencephalon
0.3698 153 TEINH1 Inhibitory neurons, pallidum Telencephalon
0.3857 154 MEINH13 Inhibitory neurons, midbrain Mesencephalon
0.8182 160 HBINH2 Inhibitory neurons, hindbrain Rhombencephalon
0.3385 164 HBGLU5 Excitatory neurons, hindbrain Rhombencephalon
0.4683 165 HBGLU6 Excitatory neurons, hindbrain Rhombencephalon
0.3891 166 HBGLU7 Excitatory neurons, hindbrain Rhombencephalon
0.3597 180 OBNBL1 Neuroblasts, olfactory Telencephalon
0.3067 181 OBNBL2 Neuroblasts, olfactory bulb Telencephalon
0.6429 182 ENT1 Nitrergic enteric neurons Neural crest
1.0187 183 ENT2 Nitrergic enteric neurons Neural crest
0.729 184 ENT3 Nitrergic enteric neurons Neural crest
0.6065 185 ENT4 Cholinergic enteric neurons Neural crest
0.6062 186 ENT5 Cholinergic enteric neurons Neural crest
0.7373 187 ENT6 Cholinergic enteric neurons Neural crest
0.6452 188 ENT7 Cholinergic enteric neurons, VGLUT2 Neural crest
1.3299 189 ENT8 Cholinergic enteric neurons, VGLUT2 Neural crest
0.7988 190 ENT9 Cholinergic enteric neurons Neural crest
0.5052 191 SYNOR1 Noradrenergic erector muscle neurons Neural crest
0.5645 192 SYNOR2 Noradrenergic neurons, sympathetic Neural crest
0.5428 193 SYNOR3 Noradrenergic neurons, sympathetic Neural crest
0.5934 194 SYNOR4 Noradrenergic erector muscle neurons Neural crest
0.68 196 SYCHO2 Cholinergic neurons, sympathetic Neural crest
0.6667 197 SYCHO1 Cholinergic neurons, sympathetic Neural crest
0.3929 198 PSPEP8 Peptidergic (TrpM8), DRG Neural crest
0.3333 200 PSPEP6 Peptidergic (TrpM8), DRG Neural crest
0.3529 202 PSPEP2 Peptidergic (PEP1.3), DRG Neural crest
0.4017 203 PSPEP4 Peptidergic (PEP1.1), DRG Neural crest
0.5761 204 PSPEP3 Peptidergic (PEP1..4), DRG Neural crest
0.5385 205 PSPEP1 Peptidergicv (PEP2), DRG Neural crest
0.4752 209 PSNP1 Non-peptidergic (TH), DRG Neural crest
0.6667 210 PSNP2 Non-peptidergic (NP1.1), DRG Neural crest
0.4556 211 PSNP3 Non-peptidergic (NP1.2), DRG Neural crest
0.6667 212 PSNP4 Non-peptidergic (NP2.1), DRG Neural crest
0.4659 213 PSNP5 Non-peptidergic (NP2.2), DRG Neural crest
0.9091 214 PSNP6 Non-peptidergic (NP3), DRG Neural crest
0.329 215 COP1 Committed oligodendrocytes cells (COP) CNS
0.311 216 COP2 Committed oligodendrocytes cells (COP), pons/medulla specific CNS
0.3204 217 NFOL2 Newly formed oligodendrocytes (NFOL), pons/medulla specific CNS
0.3244 218 NFOL1 Newly formed oligodendrocytes (NFOL) CNS
0.2874 219 MFOL2 Myelin forming oligodendrocytes (MFOL) CNS
0.2834 220 MFOL1 Myelin forming oligodendrocytes (MFOL) CNS
0.2695 221 MOL1 Mature oligodendrocytes CNS
0.2755 222 MOL2 Mature oligodendrocytes, hindbrain CNS
0.377 223 MOL3 Mature oligodendrocytes, spinal cord enriched (high Klk6) CNS
0.4498 224 CHOR Chorid plexus epithelial cells CNS
0.5628 226 EPSC Ependymal cells, spinal cord CNS
0.3915 227 EPEN Ependymal cells CNS
0.3902 239 OPC Oligodendrocytes precursor cells CNS
0.3104 241 SATG2 Satellite glia Neural crest
0.5 242 SATG1 Satellite glia, proliferating Neural crest
1.589 243 ENTG1 Enteric glia, proliferating Neural crest
0.3278 244 ENTG2 Enteric glia Neural crest
0.3727 245 ENTG3 Enteric glia Neural crest
0.4486 246 ENTG4 Enteric glia Neural crest
0.4002 247 ENTG5 Enteric glia Neural crest
0.365 248 ENTG6 Enteric glia Neural crest
0.3573 249 ENTG7 Enteric glia Neural crest
0.5918 250 ENMFB Enteric mesothelial fibroblasts Neural crest
0.3504 251 ABC Vascular leptomeningeal cells Neural crest
0.4587 254 VECA Vascular endothelial cells, arterial Mesoderm
0.5204 257 PER1 Pericytes Mesoderm
0.7828 258 PER2 Pericytes, possibly mixed with VENC Mesoderm
0.4702 259 VECC Vascular endothelial cells, capillary Mesoderm
0.4385 260 VECV Vascular endothelial cells, venous Mesoderm

Cbx1 is a marker of the following clusters

Expression Index Symbol Description Region
ENT9 ENT8 ENT6 ENT5 ENT4 ENT7 ENT3 ENT2 ENT1 ENTG1 ENTG4 ENTG2 ENTG3 ENTG6 ENTG5 ENTG7 ENMFB MOL3 MOL2 MFOL1 MOL1 MFOL2 NFOL1 NFOL2 COP2 COP1 HBSER2 HBSER1 HBSER3 HBSER4 HBSER5 TEGLU15 TEGLU16 TEGLU5 TEGLU4 TEGLU22 TEGLU23 TEGLU24 TEGLU17 TEGLU18 TEGLU19 TEGLU2 TEGLU3 TEGLU14 TEGLU13 TEGLU21 TEGLU10 TEGLU11 TEGLU20 TEGLU12 TEGLU9 TEGLU8 TEGLU7 TEINH10 TEINH11 TEINH12 TEINH9 OBINH5 TEINH5 TEINH6 TEINH7 TEINH8 TEINH4 TEINH20 TEINH13 TEINH14 TEINH16 TEINH15 TEINH19 TEINH21 HYPEP7 HYPEP6 DEINH8 MBDOP1 MBDOP2 MEGLU14 MEGLU11 MEGLU10 MEGLU9 MEGLU8 MEGLU7 MEGLU6 DEGLU5 MEGLU2 MEGLU3 MEGLU1 MEGLU5 MEGLU4 DEGLU4 DEGLU3 OBNBL1 MBCHO1 HBGLU9 SCGLU1 HBGLU10 SCGLU10 HBGLU2 HBGLU3 HBNOR HBGLU1 DEGLU2 DEGLU1 MSN1 MSN2 MSN3 MSN5 MSN4 MSN6 OEC DETPH RGDG RGSZ OPC SZNBL EPMB HYPEN OBDOP2 OBINH2 OBINH3 OBINH1 OBINH4 OBNBL2 TEGLU6 TEGLU1 DGGRC2 DGGRC1 DGNBL1 DGNBL2 OBNBL3 HYPEP3 HYPEP2 HYPEP1 CBNBL2 CBGRC CR CBNBL1 SEPNBL OBNBL5 OBNBL4 DECHO2 HYPEP5 DEINH7 HYPEP4 HBGLU8 HBGLU6 HBGLU7 HBGLU5 HBGLU4 HBCHO2 HBCHO1 HBCHO3 HBADR HBCHO4 TECHO DECHO1 SCINH1 HBINH8 HBINH7 HBINH5 CBINH2 CBPC CBINH1 MEINH1 TEINH17 TEINH18 DEINH2 DEINH1 DEINH6 MEINH13 MEINH8 MEINH14 DEINH4 DEINH5 TEINH2 TEINH1 HBINH4 HBINH3 HBINH1 SCINH11 MEINH3 MEINH4 DEINH3 MEINH2 MEINH7 MEINH5 MEINH12 MEINH11 MEINH9 MEINH10 MEINH6 HBINH6 HBINH2 SCGLU8 SCGLU9 SCGLU7 SCGLU2 SCGLU3 SCGLU4 SCGLU6 SCGLU5 SCINH5 SCINH6 SCINH7 HBINH9 SCINH2 SCINH4 SCINH3 SCINH10 SCINH9 SCINH8 TEINH3 OBDOP1 HYPEP8 ABC VLMC2 VLMC1 VSMCA PER3 VECA PER2 PER1 VECV VECC MGL1 MGL2 MGL3 PVM2 PVM1 SCHW SATG2 SATG1 ACBG ACOB ACTE1 ACTE2 ACNT1 ACNT2 ACMB EPEN EPSC CHOR SYNOR3 SYNOR2 SYNOR1 SYNOR4 SYNOR5 SYCHO2 SYCHO1 PSPEP1 PSPEP3 PSPEP2 PSPEP4 PSPEP5 PSPEP6 PSPEP7 PSPEP8 PSNF2 PSNF3 PSNF1 PSNP1 PSNP3 PSNP2 PSNP5 PSNP4 PSNP6